CMO No. 63, Series of 2016 – Amendments to CMO No. 33, Series of 2016 “Guidelines for the Institutional Development and Innovation Grants under the K to 12 Transition Program”
CMO No. 62, Series of 2016 – Policies, Standards and Guidelines (PSGs) for Transnational Education (TNE) Programs
CMO No. 61, Series of 2016 – Designated Delivering Higher Education Institutions for the CHED Engineering Faculty Training on Technopreneurship Trainers Training
CMO No. 60, Series of 2016 – Designated Delivering Higher Education Institutions for the Training of Trainors Under the Faculty Training for the New General Education (GE) Core Courses (January 4-20,2017)
CMO No. 59, Series of 2016 -New Prescribed Template of Certification, Authentication and Verification (CAV) per CMO No.5 S. 2016 “Amendments to the Guidelines on CMO No. 17 s.2016 Dated June 10, 2013 “Enhanced Policies and Guidelines for the Certication, Authentication and Verification (CAV)”
CMO No. 58, Series of 2016 – Guidelines for the Expanded Students’ Grants-In-Aid Program for Poverty Alleviation (ESGP-PA) Award
CMO No. 57, Series of 2016 – Implementing Guidelines for the Engineering Faculty Training on Technopreneurship 101
CMO No. 56, Series of 2016 – New Procedures in the Processing of Applications for Government Authority to Operate Undergraduate and Graduate Degrees in Engineering
CMO No. 55, Series of 2016 – Policy Framework and Strategies on the Internationalization of Philippine Higher Education
CMO No. 54, Series of 2016 – Revised Policies, Standards and Guidelines for the Implementation of the Expanded Tertiary Education Equivalency and Accreditation Program (ETEEAP) for Undergraduate Programs 
CMO No. 53, Series of 2016 – Guidelines for CHED Journal Incentive Program (JIP)
CMO No. 52, Series of 2016 – Pathways to Equity, Relevance and Advancement in Research, Innovation, and Extension in Philippine Higher Education
CMO No. 51, Series of 2016 – Guidelines on Eligibility of Displaced HEI Personnel to the Grants Under the K to 12 Transition Program
CMO No. 50, Series of 2016 – Implementing Guidelines for the Faculty Training for the New General Education Core Courses: Training of GE Trainors
CMO No. 49, Series of 2016 – Designated Delivering Higher Education Institutions for the Training of Trainors Under the Faculty Training for the New General Education (GE) Core Courses
CMO No. 48, Series of 2016 – Amendment to CMO No. 14, Series of 2016 ‘Guidelines for Availing Sectoral Engagement Grants Under the K to 12 Transition Program’
CMO No. 47, Series of 2016 – Strengthening the Protection of Religious Rights of Students in Higher Education Institutions
CMO No. 46, Series of 2016 – Developing Sustainable Agricultural and Fisheries Extension Programs in National Universities and Colleges in Agriculture and Fisheries (NUCAFs) and Provincial Institutes of Agriculture and Fisheries (PIAFs)
CMO No. 45, Series of 2016 – Annual Higher Education Data – Information Collection
CMO No. 44, Series of 2016 – Amending the Pertinent Provisions of Section 7. Mode of Payment in CMO No. 13 and 16, Series of 2014 Entitled “Revised Guidelines for the Implementation of StuFAPs AY 2014-2015”
CMO No. 43, Series of 2016 – Guidelines for the Processing and Evaluation of Applications for NAFES Grants-In-Aids for Agriculture and Fisheries Education
CMO No. 42, Series of 2016 – Amendment to Article V, Sections 5 and 12 of CMO No. 32, Series of 2006, Entitled “Policies, Standards, and Guidelines on the Establishment and Operation of Local Colleges and Universities (LCUs)”
CMO No. 41, Series of 2016 – Policies, Standards and Guidelines Governing the Sale, Merger or Consolidation of Private Higher Education Institutions in the Philippines
CMO No. 40, Series of 2016 – Third Batch of Approved Nominees for IRSE Grants for the First Semester of AY 2016-2017
CMO No. 39, Series of 2016 – Guidelines for Start-Up Grants for Graduate Studies Abroad For Faculty and Staff During the K to 12 Transition
CMO No. 38, Series of 2016 – Policies, Standards and Guidelines (PSG) for the Workshop Skills Training Ashore Under Annex A of CMO No. 20, Series of 2014 with Annexes
CMO No. 37, Series of 2016 – Exemption of the Bachelor of Science in Marine Transportation (BSMT) and Bachelor of Science in Marine Engineering (BSMARE) Programs from the Expanded Tertiary Education Equivalency and Accreditation Program (ETEEAP)
CMO No. 36, Series of 2016 – Guidelines on Graduate Education Scholarships for Faculty and Staff Development in the K to 12 Transition Period
CMO No. 35, Series of 2016 – Guidelines for Operation of Senior High School (SHS) in State Universities and Colleges and Local Universities and Colleges
CMO No. 34, Series of 2016 – Selective Crediting of SHS Subjects to College for SHS Graduates Entering College on AY-2016-17 and 2017-18
CMO No. 33, Series of 2016 – Guidelines for Institutional Development and Innovation Grants Under the K to 12 Transition Program
CMO No. 32, Series of 2016 – Second Batch of Approved Nominees for IRSE Grants for the first Semester of AY 2016-2017
CMO No. 31, Series of 2016 – Release of Third Batch of Approved Nominees for Graduate Education Scholarships in the K to 12 Transition Period
CMO No. 30, Series of 2016 – Implementing Guidelines for the Scholarship Grant Program for Children and Dependents of Sugarcane Industry Workers and Small Sugarcane Farmers
CMO No. 29, Series of 2016 – First Batch of Approved Nominees for IRSE Grants for the First Semester of AY 2016-2017
CMO No. 28, Series of 2016 – Second Batch of Approved Nominees for the Graduate Studies Scholarships for Faculty and Staff in the K to 12 Transition Period
CMO No. 27, Series of 2016 – Addendum to CMO No. 23 S. of 2016, Fourth Batch of Approved Delivering Higher Education Institutions (DHEIs) of the Scholarships for Graduate Studies in the K to 12 Transition Period
CMO No. 26, Series of 2016 – First Batch of Approved Nominess for the Graduate Studies Scholarships for Faculty and Staff in the K to 12 Transition Period
CMO No. 25, Series of 2016 – Guidelines for Professional Advancement and Postdoctoral Study Grants for Faculty and Staff During the K to 12 Transition Period
CMO No. 24, Series of 2016 – Transitory Provision to CMO No. 13, Series of 2014, For AY 2016-2017 and AY 2017-2018
CMO No. 23, Series of 2016 – Fourth Batch of Approved Delivering Higher Education Institutions (DHEIs) of the Scholarsips for Graduate Studies un the K to 12 Transition Period
CMO No. 22, Series of 2016 – Guidelines for Foreign Scholarships for Graduate Studies for Faculty and Staff during the K to 12 Transition Period
CMO No. 21, Series of 2016 – Guidelines for CHED Support for the Grants-In-AID to Undergraduate Filipino Students Participating in International Conferences and-or Seminars
CMO No. 20, Series of 2016 – Private Higher Education Institutions Granted Autonomous and Deregulated Status
CMO No. 19, Series of 2016 – Benefits and Responsibilities of Autonomous and Deregulated Private Higher Education Institutions
CMO No. 18, Series of 2016 – Policies, Standards and Guidelines for Doctor of Medicine (M.D.) Program
CMO No. 17, Series of 2016 – COEs CODs for Teacher Education
CMO No. 16, Series of 2016 – Third Batch of Approved Delivering HEIs of the Scholarships for Graduate Studies in the K to 12 Transition Period
CMO No. 15, Series of 2016 – Designated Centers of Excellence (COEs) and Centers of Development (CODs) for Engineering Programs
CMO No. 14, Series of 2016 – Guidelines for Availing of Instruction, Research and Sectoral Engagement Grants Under the K to 12 Transition Program
CMO No. 13, Series of 2016 –  Implementing Guidelines for Industry Partnerships Under the Sectoral Engagements Component of the IRSE Grants
CMO No. 12, Series of 2016 – Implementing Guidelines for Civil Society Partnerships Under The Sectoral Engagements Component of the IRSE Grants
CMO No. 11, Series of 2016 – Guidelines for Delivery of Instruction, Research and Sectoral Engagement (IRSE) Grants Under the K to12 Transition Program
CMO No. 10, Series of 2016 – Second Batch of Delivering HEIs of the Scholarships for Graduate Studies in the K to 12 Transition Period
CMO No. 09, Series of 2016 – Guidelines for Senoir High School (SHS) Support Grants Under the K to 12 Transition Program
CMO No. 08, Series of 2016 – First Batch of Approved Delivering HEIs of the Scholarships for Graduate Studies in the K to 12 Transition Period
CMO No. 07, Series of 2016 – Supplemental to CHED Memorandum Order No. 38, series of 2015, Entitled “Designated Centers of Excellence (C0Es) and Centers of Development (CODs) for Various Disciplines
CMO No. 06, Series of 2016 – Extension of the Validity Period of Autonomous and Deregulated Status of Private HEIs Effective January 1, 2016 until March 31, 2016 or earlier upon the Issuance of the Results of Evaluation of Applications for Vertical Typology 
CMO No. 05, Series of 2016 –  Amendments to the Guidelines on CMO No. 17 series of 2013 Date June 10, 2013 “Enhanced Policies and Guidelines for the Certification, Authentication and Verification (CAV) of School Documents”
CMO No. 04, Series of 2016 – Guidelines on Graduate Education Delivery for Faculty and Staff Development in the K to 12 Transition Period
CMO No. 03, Series of 2016 – Guidelines on Graduate Education Scholarships for Faculty and Staff Development in the K to 12 Transition Period
CMO No. 02, Series of 2016 –  Supplemental to CMO No. 38, Series of 2015, Entitled ‘Designated Centers of Excellence (COEs) and Centers of Development (CODs) for Various Disciplines’
CMO No. 01, Series of 2016 –  Amendment to CMO No. 38, Series of 2015, Entitled ‘Designated Centers of Excellence (COEs) and Centers of Development (CODs) for Various Discipline